Identification
Trichloroacetic acid solution
Prepare a solution of trichloroacetic acid (see Reagent Specifications in the section Reagents, Indicators, and Solutions) in water containing 100 g trichloroacetic acid per 100 mL of the solution.
Sample buffer
Prepare a solution containing 141 mM tris(hydroxymethyl)aminomethane, 106 mM tris(hydroxymethyl)aminomethane hydrochloride, 0.51 mM edetate disodium, 2% (w/v) dodecyl lithium sulfate, 10% (v/v) glycerol, 0.22 mM Coomassie blue G-250, and 0.175 mM phenolsulfonphthalein. If necessary, adjust with hydrochloric acid or sodium hydroxide to a pH of 8.5.
Running buffer
Prepare a solution containing 25 mM tris(hydroxymethyl)aminomethane, 192 mM glycine, and 0.1% (w/v) dodecyl sodium sulfate (see Reagent Specifications in the section Reagents, Indicators, and Solutions) in water. If necessary, adjust with hydrochloric acid or sodium hydroxide to a pH of 8.5.
Transblotting buffer
Prepare a solution containing 12.5 mM tris(hydroxymethyl)aminomethane, 96 mM glycine, and 10% (v/v) methanol. If necessary, adjust with hydrochloric acid or sodium hydroxide to a pH of 8.0.
Blocking buffer
Prepare a solution containing 10 mM monobasic sodium phosphate, 150 mM sodium chloride, 5% (w/v) nonfat dry milk, and 0.05% (w/v) Polysorbate 20. Adjust with sodium hydroxide to a pH of 7.4.
Primary antibody solutions
Prepare suitable monoclonal antibodies raised against the Protective Antigen (PA), the Lethal Factor (LF), and the Edema Factor (EF), respectively, of Bacillus anthracis in murine ascites cells, harvested, and used without further purification. Immediately before use, dilute each of the murine ascites fluids containing the monoclonal antibodies 1:1000 (v/v) with the Blocking buffer.
Secondary antibody solution
Immediately before use, dissolve according to the manufacturer's instructions, if necessary, and dilute the stock horseradish peroxidase conjugated to goat anti-mouse IgG solution 1:1000 with Blocking buffer.
Chromogenic visualization solution
Prepare a 150 mg per mL solution of 4-chloro-1-naphthol in water.
Test solution
Use Anthrax Vaccine Filtrate as is.
Procedure
In a suitable centrifuge tube transfer 30/
c mL of the
Test solution, where
c is the total protein concentration, in µg per mL, of the solution as determined in the test for
Total protein. Add 16.5/
c mL of
Trichloroacetic acid solution, and incubate for at least 10 minutes. Centrifuge at 9000
g for about 10 minutes, decant off the supernatant, and hold the tube inverted to drain on a filter paper. Dissolve the pellet in about 60 µL of
Sample buffer, and transfer the solution to a polypropylene microfuge tube that has a lid. Close the lid tightly, secure with a lid-lock, and heat at 100
for 5 minutes. Allow the solution to cool to room temperature, and centrifuge at 10,000
g for 15 seconds to collect the liquids. In a suitable device for polyacrylamide-gel electrophoresis (see
Electrophoresis 726 and the section
Polyacrylamide Gel Electrophoresis under
Biotechnology-Derived ArticlesTests 1047) add appropriate volumes of the
Running buffer in the upper and the lower buffer chambers. Attach a 4%20% gradient tris-glycine polyacrylamide slab gel sandwiched between two glass plates, such that the wells for sample application are exposed to the
Running buffer in the upper buffer chamber. Apply about 20-µL aliquots of the treated
Test solution in three alternate lanes.
[NoteDo not apply any solution in the outside lanes.
] Connect the lower buffer chamber electrode to the positive terminal and the upper buffer chamber electrode to the negative terminal of a suitable power supply unit, and carry out the electrophoresis at a constant current of about 40 mA. When the dye-front is about 1 cm from the bottom of the gel (about 40 minutes), stop the current, and remove the gel from the gel assembly.
[NoteDo not touch the gel with bare hand. Use gloves.
]
Place 34 filter papers, cut to the size of the gel and soaked in the Transblotting buffer, on the anode plate of a suitable semidry electroblotter. Cut a nitrocellulose membrane to the same size as the gel plus 12 mm on each side, and wet the membrane by immersing it into the Transblotting buffer for about 15 seconds, such that there is no air-bubble between the buffer and the membrane. Place the wet membrane immediately on the stack of filter papers, and remove all air bubbles between the membrane and filter paper by rolling a pipet, or equivalent, gently over the surface of the membrane. Place a few drops of the Transblotting buffer on the membrane, and then carefully place the gel on it. Gently roll a pipet, or equivalent, over the surface of the gel to ensure intimate contact between the gel and the membrane, making sure that there are no air bubbles in between. Place a filter paper cut to the size of the gel and soaked in the Transblotting buffer, such that there is no air-bubble between the filter paper and the gel. Place 23 additional filter papers, prepared in a similar manner, on the top, and complete the transfer stack by placing the cathode plate on the top. Apply a current of about 250 mA, and continue transfer for 90 minutes.
Remove the membrane, and wash it quickly by immersing into water for 15 seconds.
[NoteDo not touch the membrane with bare hand. Use gloves.
] Cut the membrane into three strips such that each strip contains a lane containing the
Test solution, and mark the strips as PA, LF, and EF at the top. Place each strip in a heat-sealable bag, add 5 mL of
Blocking buffer, and seal the bag. Incubate for 30 minutes with constant agitation. Open each bag, and pour out the
Blocking buffer. Add 9 mL of the diluted
Primary antibody solution against PA to the bag containing the strip marked PA. Similarly, add 9 mL of the diluted
Primary antibody solution against LF and EF to the bags containing strips labeled LF and EF, respectively. Seal the bags, and incubate under agitation for 2 hours at room temperature or overnight at 2
to 8
. Remove the strips from the plastic bags, and place in separate plastic boxes. Add sufficient
Blocking buffer so that each strip is completely immersed. Agitate for at least 30 minutes at room temperature with two changes of
Blocking buffer. Remove the strips, and place each strip in a new heat-sealable plastic bag. Add 9 mL of the
Secondary antibody solution to each plastic bag. Seal the bags, and incubate for 1 hour at room temperature under agitation. Remove the strips from the plastic bags, and place in separate plastic boxes. Add sufficient
Blocking buffer so that each strip is completely immersed. Agitate for at least 30 minutes at room temperature with two changes of the
Blocking buffer. Transfer each strip into a new heat-sealable plastic bag, add 9 mL
Chromogenic visualization solution, 10 µL of 30% (v/v) hydrogen peroxide, and seal the bags. Incubate for about 30 minutes under agitation. Transfer the strips into separate plastic boxes, and remove the excess 4-chloro-1-naphthol by incubating with water under agitation for 10 minutes. Visual observation indicates a strong positive band on the strip labeled PA (Protective Antigen), a faintly detectable band on the strip labeled LF (Lethal Factor), and no detectable band on the strip labeled EF (Edema Factor).
83 kDA protein
Trichloroacetic acid solution, Sample buffer, Running buffer, and Test solution
Prepare as directed under Identification.
Staining solution
Prepare a solution of Coomassie blue G-250 having a concentration of 1.25 g per L in a mixture of water, methanol, and acetic acid (5:4:1, v/v).
Protein molecular weight standard solution
Reconstitute a vial of protein molecular weight standard mixture containing proteins of molecular weights at least in the range of 14 to 200 kDa, according to manufacturer's instruction. Dilute the solution with Sample buffer such that the concentration of each protein in the solution is about 0.5 µg per µL.
Procedure
In a suitable centrifuge tube transfer 10/
c mL of the
Test solution, where
c is the total protein concentration, in µg per mL, of the solution as determined by the test for
Total protein (see below). Add 5.5/
c mL of
Trichloroacetic acid solution, and incubate for at least 10 minutes. Centrifuge at 9000
g for about 10 minutes, decant off the supernatant, and hold the tube inverted to drain on a filter paper. Dissolve the pellet in 20 µL of
Sample buffer, and transfer the solution to a polypropylene microfuge tube with a lid. Transfer 20 µL of
Protein molecular weight standard solution to another polypropylene microfuge tube with a lid. Close the lids tightly, secure with lid-locks, and heat both solutions at 100
for 5 minutes. Allow the solutions to cool to room temperature, and centrifuge at 10,000
g for 15 seconds to collect the liquids. Apply the solutions to two consecutive lanes of a 4%20% gradient tris-glycine polyacrylamide slab gel
[NOTEDo not apply any solution in the outside lanes.
], and electrophorese as directed under
Identification (see
Electrophoresis 726 and the section
Polyacrylamide Gel Electrophoresis under
Biotechnology-Derived ArticlesTests 1047). When the dye-front is about 1 cm from the bottom of the gel (about 40 minutes), stop the current, and remove the gel from the gel assembly. Soak the gel in a suitable volume of the
Staining solution for at least 1 hour, such that the gel is completely immersed in the
Staining solution during staining.
[NOTEDo not touch the gel with bare hand. Use disposable gloves.
] Destain the gel with a large volume of water under constant agitation with repeated changes of water until the background of the gel is completely color free. Using the molecular weights of the proteins in
Protein molecular weight standard solution, identify the band corresponding to the Protective Antigen (MW about 83 kDa) in the
Test solution lane.
[NoteThis band is also the single most predominant band in the lane of the
Test solution.
] Scan the gel, and determine the relative amount (by peak area) of the 83-kDa band by densitometry in the lane of the
Test solution. The content of 83 kDa band is not less than 35% of the total peak area.
Total protein
Standard solution A
Prepare a solution of albumin bovine serum (see Reagent Specifications in the section Reagents, Indicators, and Solutions) in water to obtain a known concentration of about 2.0 mg per mL.
Standard solutions B, C, D, and E
Dilute Standard solution A with water to obtain solutions having protein concentrations of 4, 8, 16, and 24 µg per mL, respectively.
Test solution
Use Anthrax Vaccine Filtrate as is.
Procedure (See Biotechnology-Derived ArticlesTests 1047, Total Protein Assay, Method 3)
To a series of test tubes transfer 800 µL each of
Standard solutions B, C, D, and
E and the
Test solution. Also transfer 800 µL of water to be used as the blank. Add 200 µL of Coomassie blue G-250 dye solution (see
Reagent Specifications in the section
Reagents, Indicators, and Solutions) to each tube, and mix without foaming. Determine absorbances of the solutions at 595 nm using a suitable spectrophotometer (see
Spectrophotometry and Light-Scattering 851 ), using the blank to set the instrument to zero.
[NOTEDo not use quartz (silica) spectrophotometer cells; the dye binds to silica.
] Construct a standard curve by plotting the absorbances versus protein concentrations, in µg per mL, of
Standard solutions B, C, D, and
E and by drawing a best-fit straight line using the linear regression method. From the standard curve, determine the total protein concentration of the
Test solution using the absorbance value. The protein concentration is between 5 and 20 µg per mL.